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Further research showed that p38 was crucial for PRRSV-induced SOCS3 production. Importantly, SOCS3 enhanced PRRSV replication during infection. Taken together, this study indicates that PRRSV infection induced SOCS3 expression through p38/AP-1 signaling pathway. These results revealed the molecular basis of SOCS3 upregulation and would advance further understanding of the strategy for viral immune evasion.Rabbit haemorrhagic disease (RHD) is caused by a lagovirus affecting European rabbits (Oryctolagus cuniculus). Viral RNA is detected in tissues or faeces of convalescent rabbits, suggesting persistent infections; however, this RNA has not been shown to be related to infective viruses to date. In the present work, seven laboratory rabbits were challenged with the RHDV2/b virus variant. Viral RNA was individually detected by duplex qPCR in faeces collected for four weeks after infection, and the infective capacity of viral RNA excreted in the faeces of surviving rabbits was tested by challenging new rabbits with faecal inocula. As results, viral RNA was detected in faeces until the end of the assay. Viral RNA detected in the fourth week was infective only in the case of one rabbit that did not exhibit clear seroconversion, suggesting persistent infection as a result of an impaired immune response. Since the surviving rabbits were apparently healthy individuals, the importance of detecting carriers and the correct management of faeces to control RHD outbreaks in rabbitries are highlighted.
In HIV-1-exposed infants, nucleic acid testing (NAT) is required to diagnose infection since passively transferred maternal antibodies preclude antibody testing. The sensitivity of clinical NAT assays is lowered with infant antiretroviral prophylaxis and, with empiric very early antiretroviral treatment of high-risk infants, thereby impacting early infant diagnosis. Similarly, adult HIV-1 infections acquired under pre-exposure prophylaxis may occur at low levels, with undetectable plasma viremia and indeterminate antibody tests, for which HIV-1 DNA testing maybe a useful adjunct. Cell-associated HIV-1 DNA concentrations are also used to monitor HIV-1 persistence in viral reservoirs with relevance to HIV-1 cure therapeutics, particularly in perinatal infections.
We clinically validated an HIV-1 DNA quantitative assay using droplet digital PCR (ddPCR), across different HIV-1 subtypes.
The analytical sensitivity and specificity of an HIV-1 DNA ddPCR assay was determined using serial dilutions of a plasmid containing HIV-1 LTR-gag spiked into peripheral blood mononuclear cells (PBMCs), with MOLT-4 cells or PBMCs infected with different HIV-1 subtypes (A, B and C), and U1 cells spiked into PBMCs. Inter- and intra-run variability were used to determine assay precision.
The HIV-1 LTR-gag ddPCR assay was reliable and reproducible, and exhibited high analytical specificity with sensitivity to near single copy level, across multiple HIV-1 subtypes, and a limit of detection of 4.09 copies/million PBMCs.
This assay has applications for detecting occult HIV-1-infection in the setting of combination and long-acting regimens used for HIV-1 prevention, across different HIV-1 subtypes, in infants and adults, and in HIV-1 cure interventions.
This assay has applications for detecting occult HIV-1-infection in the setting of combination and long-acting regimens used for HIV-1 prevention, across different HIV-1 subtypes, in infants and adults, and in HIV-1 cure interventions.Land use changes are occurring with unprecedented magnitude and intensity, imposing global impacts on ecosystem services (ES) and biodiversity. While the impacts of land use changes are increasingly recognized, understanding how landscape connectivity is related to ecosystem functioning is lacking. In the Argentinian Dry Chaco, deforestation increased forest fragmentation but strips of native forest (linear remnants) were usually left after clearings. Although the number of ecological studies on forest strips has increased, their contribution to forest connectivity and functioning has not been assessed. We evaluated the contribution of forest strips to forest connectivity and estimated its effect on forests' functioning considering low, moderate, and high species' dispersal abilities in our estimation. The effects of forest strip connectivity contribution to the forests' Ecosystem Services Supply Index (Forests' ESSI) was also analyzed. Forest strips contributed on average 6% and up to 40% to forest connectivity for moderate dispersal abilities, while low and high dispersals presented low values in almost all cases. The connectivity contribution was highest (between 15 and 40%) and variable for moderate dispersal abilities in landscapes with between 25 and 35% of forest cover. High connectivity contribution was generally achieved for low and moderate dispersals when forest strips conformed a network among forest patches. Forest strip connectivity significantly increased the forests' ESSI (between 1.3 and 2.4% per unit of connectivity contribution) and its effect was higher in comparison to forest amount and fragmentation. This study provides insights for planning the location of forest strips and forest remnants in agricultural landscapes, thus increasing forest connectivity for enhancing ecosystem functioning.Groundwater recharge sources analysis, including identification of the recharge sources and calculation of the mixing ratios, is of great importance for hydrogeological research and water resources management. MitomycinC In this research, a new approach, multivariate mixing and mass-balance calculations (M3) model combined with MIX calculations (M3-MIX calculations), was proposed to overcome shortcomings and limitations of existing methods and to accurately describe aquifer systems with more than three groundwater sources and get more accurate mixing ratios. A synthetic case with random sources were applied to evaluate the effectiveness of M3-MIX calculations. The results of both mixing ratios and composition of recharge sources show that M3-MIX calculations is superior to traditional methods such as least squares, and is also superior to the results obtained by using M3 model or MIX calculations alone. The approach is then applied to analyze groundwater recharge sources of the Huangshui River groundwater reservoir, China.
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